Wheat Practical Haplotype Graph Database (Jordan et al., 2021).

https://doi____

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├── all2500imputed_genotypes_WC65PHG.vcf.gz (all imputed genotypes exported from the PHG)
├── Beagle_0.1x_imputedfinal.vcf.gz (Beagle imputed output file for 0.1x coverage)
├── Beagle_target0.1x_imputation.vcf.gz (Input Target file for imputation with Beagle using GATK using 0.1x data)
├── Beagle_0.01x_imputedfinal.vcf.gz (Beagle imputed output file for 0.01x coverage)
├── Beagle_target0.01x_imputation.vcf.gz (Input Target file for imputation with Beagle using GATK using 0.01x data)
├── DS75-0.1x_imputed.vcf.gz (PHG imputed file)
├── NAMskim_phg_imputed.vcf.gz (PHG imputed file)
├── DS75-0.01x_imputed.vcf.gz (PHG imputed file)
├── DS75-0.5x_imputed.vcf.gz (PHG imputed file)
├── NAMgbs_imputed_PHG.vcf.gz (PHG imputed file)
├── GBS70_phgimputed.vcf.gz (PHG imputed file including the GBS from NAM parents)
└── WC65phg.db.gz (the database crated using PHG software)